Acceptance and utilization of LTER data requires that:
(1) The Principal Investigator be sent a notice stating reasons for acquiring any data and a description of the publication intentions.
(2) The Principal Investigator of the data set be sent a copy of the report or manuscript prior to submission and be adequately cited in any resultant publications.
(3) A copy of any resultant publications should be sent to:
Marine Biological Laboratory
7 MBL St.
Woods Hole, MA 02543
|Dataset URLs:||METADATA: HTML, Rich Text, XML(EML compliant) |
DATA: Comma Delimited, Excel file with Metadata and data
|Dataset Title:||Year 2007, 15 minute interval, water quality measurements of water column temperature, salinity, oxygen, and depth in the upper Parker River Estuary at Middle Road Bridge, Newbury, MA.|
|Investigator 1:|| |
|Address line 1:||University of Georgia|
|Address line 2:||229 Marine Sciences|
|Address line 3:|
|Associate Investigators:||Hap Garritt|
|Keywords:||PIE LTER, primary production, disturbance, temperature, oxygen, conductivity, salinity, depth, saturation, gas, Parker River, monitoring|
|Abstract:||Year 2007, Continuous, 15 minute time interval, water quality measurements of water column temperature, salinity, conductivity, oxygen and depth in the upper Parker River Estuary at Middle Road Bridge, Newbury, MA.|
|Contact:||Plum Island Ecosystems LTER Information Manager
The Ecosystems Center
Marine Biological Lab
7 MBL St
Woods Hole, MA 02543
Phone (508) 289 7485
Online URL: http://pie-lter.ecosystems.mbl.edu
|DATA FILE INFORMATION:|
|Data File URL||http://ecosystems.mbl.edu/PIE/data/MON/data/MON-PR-MBYSI2007.csv|
|Data File Name||MON-PR-MBYSI2007|
|Number of Data Records||22932|
|Other Files to Reference|
|Availability Status||Type 1|
|Quality Control Information|
|Log of Changes:||Version 01: February 24, 2012, updated data and metadata. Used MarcrosExportEML_HTML (working)pie_excel2007.xlsm 2/9/12 1:33 PM for QA/QC to EML 2.1.0|
|Version 02: June 29, 2017, updated data and metadata for DEIMS 7 and PASTA.Used MarcrosExportEML_HTML (working)pie_excel2007_Jun2017.xlsm 6/15/17 10:23 AM for QA/QC to EML 2.1.0|
|RESEARCH LOCATION:||MON-PR-P18.5-MiddleRdBridgeWQ||Site 2|
|Geographic Description||YSI water quality sonde at Middle Rd (Thurlow's Bridge) on Parker River, Byfield, MA|
|Location Bounding Box|
|West Bounding Coordinate|
|East Bounding Coordinate|
|North Bounding Coordinate|
|South Bounding Coordinate|
|OR if single point location|
|Methods:||Measurements are made using a YSI 6600 water quality sonde with internal datalogging capabilities. YSI Sonde sensors consist of 6562 dissolved oxygen probe (rapid pulse – Clark type,polarographic), 6560 conductivity/temperature probe (thermistor), vented level depth sensor (stainless steel strain gauge).|
Missing data or blank values are caused by maintenance time periods or where sensor measurements are obviously wrong in the context of what would be expected. For example, the conductivity sensor has a relatively small opening and chamber for the conductivity electrodes, the estuary can have varying suspended sediment/detrital loads moving in the water column which enter the conductivity cell shorting out the electrodes making a faulty conductivity measurement (lower than expected). Oxygen measurements are dependent upon the conductivity measurements so the oxygen also becomes erroneous. Obvious measurements/data errors have been removed from the data set however the user of this data should also conduct their own data analysis to determine if the data are suitable for their particular situation.
Typical sensor/data problems are:
For oxygen: Fouling of Clark style DO probe where membrane gets a brownish bacterial? film affecting DO sensor readings/calibration checks.
For conductivity: Conductivity cell can have detrital material stuck in it, shorting out cell, resulting in lower than expected conductivity.
For depth: Depth strain gage pressure sensor may come out of the water at low tides resulting in many "zero" depth readings or sometimes negative values.
YSI Dissolved oxygen % saturation reporting can vary depending upon how the oxygen is calibrated.
For this data set two Oxygen percent saturation values are reported.
DO%YSI variable name represents a YSI calibration in air, from Standard Methods, refers to calibration at a particular ATM pressure which allows DO% for calibration to fluctuate above/below 100% when ATM is above/below reference 760 or 1 ATM
DO%Local variable name represents an oxygen calibration in air at a particular ATM pressure but it forces the DO% to be 100%, does not allow it to be under or above if ATM is above/below 760.
DO%Local data should be used for metabolism studies when correcting for diffusion based on gradient deviations from 100% which by definition is the % saturation of oxygen in air.
DO%YSI should not be used since it would require a known ATM pressure at each interval to calculate the ATM % saturation of oxygen to be use for that interval, probably a small correction anyway.
Concentration of DO remains the same for either calibration.
|Variable Name||Variable Description||Units||Measurement Scale||Code Information||Number Type||DateTime Format||Missing Value Code||Missing Value Code Explanation|
|Date||Date of sampling||datetime||dd-mon-yyyy||NA||NA = not available|
|Time||Time of sampling (eastern standard time EST), 24 hr||datetime||hh:mm:ss||NA||NA = not available|
|Station||Name of sampling station||nominal||NA||NA = not available|
|Temp||Temperature of water||celsius||interval||real||NA||NA = not available|
|SpCond||Specific conductivity of water||millisiemenPerCentimeter||ratio||real||NA||NA = not available|
|Cond||Conductivity of water||millisiemenPerCentimeter||ratio||real||NA||NA = not available|
|Salinity||Salinity of water||partPerThousand||interval||real||NA||NA = not available|
|DO%YSI||Clark style percent dissolved oxygen saturation of water, YSI calibration varies with ATM pressure||percent||ratio||real||NA||NA = not available|
|DO%Local||Clark style percent dissolved oxygen saturation of water, calibration fixed at 100% in air||percent||ratio||real||NA||NA = not available|
|DO Conc||Dissolved oxygen concentration of water||milligramPerLiter||ratio||real||NA||NA = not available|
|DO Charge||Dissolved oxygen sensor charge||dimensionless||ratio||real||NA||NA = not available|
|Depth||Water column depth above sonde pressure transducer||meter||ratio||real||NA||NA = not available|
|Comments||Comments about specific data||nominal||NA||NA = not available|