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Arctic LTER Database
Arctic LTER Database
Conditions of Use
The re-use of scientific data has the potential to greatly increase communication, collaboration and synthesis within and among disciplines, and thus is fostered, supported and encouraged. Permission to use this dataset is granted to the Data User free of charge subject to the following terms:
1) Acceptable use. Use of the dataset will be restricted to academic, research, educational, government, recreational, or other not-for-profit professional purposes. The Data User is permitted to produce and distribute derived works from this dataset provided that they are released under the same license terms as those accompanying this Data Set. Any other uses for the Data Set or its derived products will require explicit permission from the dataset owner.
2 ) Redistribution. The data are provided for use by the Data User. The metadata and this license must accompany all copies made and be available to all users of this Data Set. The Data User will not redistribute the original Data Set beyond this collaboration sphere.
3 ) Citation. It is considered a matter of professional ethics to acknowledge the work of other scientists. Thus, the Data User will properly cite the Data Set in any publications or in the metadata of any derived data products that were produced using the Data Set. Citation should take the following general form: Creator, Year of Data Publication, Title of Dataset, Publisher, Dataset identifier. For example:
Shaver, G. 1989. Above ground biomass in acidic tussock tundra experimental site, 1989, Arctic LTER, Toolik, Alaska. Arctic LTER, Marine Biological Lab, Woods Hole, Ma 02543. 1989gsttbm http://ecosystems.mbl.edu/arc/terrest/biomass/index.shtml
4 ) Acknowledgement. The Data User should acknowledge any institutional support or specific funding awards referenced in the metadata accompanying this dataset in any publications where the Data Set contributed significantly to its content. Acknowledgements should identify the supporting party, the party that received the support, and any identifying information such as grant numbers. For example:
Data sets were provided by the Arctic LTER. This material is based upon work supported by the National Science Foundation under Grants #DEB-981022, 9211775, 8702328; #OPP-9911278, 9911681, 9732281, 9615411, 9615563, 9615942, 9615949, 9400722, 9415411, 9318529; #BSR 9019055, 8806635, 8507493.
5 ) Notification. The Data User will notify the Data Set Contact when any derivative work or publication based on or derived from the Data Set is distributed. The Data User will provide the data contact with two reprints of any publications resulting from use of the Data Set and will provide copies, or on-line access to, any derived digital products. Notification will include an explanation of how the Data Set was used to produce the derived work.
6 ) Collaboration. The Data Set has been released in the spirit of open scientific collaboration. Data Users are thus strongly encouraged to consider consultation, collaboration and/or co-authorship with the Data Set Creator.
By accepting this Data Set, the Data User agrees to abide by the terms of this agreement. The Data Owner shall have the right to terminate this agreement immediately by written notice upon the Data User's breach of, or non-compliance with, any of its terms. The Data User may be held responsible for any misuse that is caused or encouraged by the Data User's failure to abide by the terms of this agreement.
Disclaimer
While substantial efforts are made to ensure the accuracy of data and documentation contained in this Data Set, complete accuracy of data and metadata cannot be guaranteed. All data and metadata are made available "as is". The Data User holds all parties involved in the production or distribution of the Data Set harmless for damages resulting from its use or interpretation.
| Dataset URLs: | METADATA: HTML, Rich Text, XML(EML compliant) DATA: Comma Delimited, Excel file with Metadata and data |
| Dataset ID: | 1990_2000ArcLIDETMass.05 |
| Dataset Title: | Long-term Carbon and Nitrogen, and Phosphorus Dynamics of Leaf and Fine Root Litter project (LIDET-Long-term Intersite Decomposition Experiment Team) data for the ARC, Arctic LTER. 1990 to 2000. |
| Investigator 1: |   |
| First Name: | Mark | | Last Name: | Harmon | | Organization: | Department of Forest Science | | Address line 2: | 020 Forestry Sciences Lab | | Address line 3: | Oregon State University | | City: | Corvallis | | State: | OR | | Zip Code: | 97331-7501 | | Country: | USA | | Investigator 2: |   |
| First Name: | Jim | | Last Name: | Laundre | | Organization: | | | Address line 2: | | | Address line 3: | | | City: | | | State: | | | Zip Code: | | | Country: | | | Associate Investigators: | |
| Keywords: | decomposition, decay rates, litterbags, leaf litter, fine roots, wood, nitrogen, phosphorus, carbon fractions, organic matter |
| Abstract: | This file is from the Long-term Carbon and Nitrogen, and Phosphorus Dynamics of Leaf and Fine Root Litter project (LIDET-Long-term Intersite Decomposition Experiment Team). This file contains only the Arctic LTER data. In particular the mass looses over the ten year study. Three types of fine roots (graminoid, hardwood, and conifer), six types of leaf litter (which ranged in lignin/nitrogen ratio from 5 to 75), and wooden dowels were used for litter incubations over a ten year period. |
For questions about the Metadata and data contact the Investigators. For information about this web site contact: |
Arctic LTER Information Manager
The Ecosystems Center
Marine Biological Lab
7 MBL St
Woods Hole, MA 02543
Phone (508) 289 7496
Email: arc_im@mbl.edu
Online URL: http://ecosystems.mbl.edu/ARC/ |
| DATA FILE INFORMATION: |
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| Data File URL |
http://metacat.lternet.edu/das/dataAccessServlet?docid=knb-lter-arc.1409&urlTail=terrest/litter/data/1990_2000ArcLIDETMass.csv |
| Data File Name |
1990_2000ArcLIDETMass |
| Beginning Date |
8/23/1990 |
| End Date |
8/22/2000 |
| Number of Data Records |
551 |
| Other Files to Reference |
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| Quality Control Information |
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| Maintenance Description |
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| Log of Changes: |
For Archival Use: |
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Version 2: Checked and updated attribute table |
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Version 3: Added LTERNET Data Access server proxy for Excel and comma delimited data files. |
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Version 4: Upadte LTERNET Data Access server proxy link for Excel and comma delimited data files. Changed from knb to das in url. |
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Version 5: Missing values replaced with #N/A. Updated metadata form to newer version (without site sheet). Fixed discrepency with header variable names. CH 24 Jan 2013 Updated to newer metadata with site sheet. CH March 2013. |
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| Location Name |
LTER Moist Acidic Tussock Tundra |
LTER Moist Acidic Tussock Tundra 1981 plots |
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| Geographic Description |
Arctic LTER, Toolik Field Station, North Slope Alaska(68 degrees 38'N, 149 degrees 34'W, elevation 760 m). Moist Acidic Tussock Tundra. |
Toolik Lake(68 degrees 38'N, 149 degrees 34'W, elevation 760 m) Tussock Tundra - 1981 plots, control |
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| Latitude |
68.62405 |
68.6295 |
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| Longitude |
-149.61058 |
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| Elevation |
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| Link to Google Map |
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| TAXONOMIC COVERAGE: |
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| Organisms studied |
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| Methods: | Litter Collection Each site was responsible for collecting the litter used in the experiments. For most sites, the leaf litter was collected directly from senesecent plants or as freshly fallen litter. Green leaves were collected from the Jornada, San Diego, Luquillo, and LaSelva sites. All leaf litter except, Drypetes glauca which was oven dried at 40 C to prevent decay, was air dried prior to shipment to Oregon State University. Fine roots (<2 mm diameter) were collected by two methods: tropical hardwood (Drypetes glauca) and pine (Pinus elliotii) fine roots were collected by excavating surface roots and washing. Graminoid roots were collected from material exposed along stream banks. Graminoid and pine roots were air dried, whereas the tropical hardwood roots were oven dried at 40 C to prevent decomposition. In the case of the LaSelva site, the litter was sterilized after the bags were filled to kill all invertebrates, fungi, and virus prior to shipment. Sterilization was conducted at the Battelle National Laboratory by exposing the litter to 20 hours of gamma rays with 60Co as the source. The total exposure was 2 Mrad. Bag Design All bags were 20- by 20-cm and filled with 10 g leaves and 5-7 g of fine roots. Each bag was identified with a unique number embossed on an aluminum tag. The bag openings were sealed with six monel staples. The initial air dry weight, calculated oven dry weight, species, site, replicate number for each litterbag were recorded prior to placement in the field. Subsamples of litter material were taken to determine the air dry to oven dry conversion factor and the initial chemistry of the litter. Moisture content of the air dried litter ranged from 2-10% moisture content. Three types of bags were used in this experiment. For the long-term leaf litter experiment the bags had a top mesh of 1 mm and a bottom of 55 micron mesh. The bags used for fine roots were entirely of 55 micron mesh. The bags used in the mesh size effects study had a top of 7 mm mesh and a bottom of 55 micron mesh. Dowels The wooden dowels used in the experiment are made of ramin (Gonystlylus bancannus). This species is a tropical hardwood from southeast Asia. It is not resistant to decay and rated as perishable. The dowels are 13 mm in diameter and 61 cm in length. One half of the dowel is to be embedded vertically into the soil and the other half is to be exposed to aerial conditions. The air dry weight of each dowel was recorded, and a subsample of dowels was measured for diameter, density, air dry moisture content, nitrogen content, and carbon chemistry. Sample Placement Samples were placed in the field during fall of 1990 by each of the participating sites. Locations were near climatic stations and in areas protected from disturbances that could destroy the litter bags. The locations were also selected to be typical of areas that other intersite decomposition experiments might be conducted. The exact method for placement varied from site to site, but the following standards were applied: 1) Four separate locations were selected to avoid pseudo- replication problems. 2) Each set of bags to be collected was connected by a cord; these sets of bags should be laid out in parallel lines in a random order. 3) Leaf litterbags should be placed so that contact with the underlying litter layer is made. Fine root litterbags will be inserted into the upper mineral soil (humus layer for histosols). A vertical cut with a shovel, the bag inserted the correct depth (0-20 cm), and another cut should be used to press the soil against the bag (Figure 3). 4. Dowels should be installed at the end of the string opposite the fine root bags. The dowels were placed so that 30 cm is exposed to the air and 30 cm is embedded in the soil. Sample Processing Once the litter or dowels are collected they should be oven dried in a paper bags at 55oC until the mass is stable. In the case of fine roots and dowels, a rinse with distilled water to remove adhering soil prior to drying is recommended. Any mosses, lichens, fine roots, or other plant parts that have grown into the bags or dowels should also be removed prior to harvesting. Samples will be pooled by species, site, and time for grinding and archiving. A subset of unpooled samples will also be saved to determine the internal variability of pooled samples. Chemical analyses will be performed using two methods. Each pooled sample from each species, site, and time will be analyzed for total nitrogen, lignin, and cellulose using near infrared reflectance spectoscopy (Wessman et al. 1988). Internal variability of samples will be estimated by running replicates of high and low lignin species. Twenty five percent of the pooled samples will also be sampled for Kjeldahl nitrogen, lignin, cellulose, water extractive, non- polar extractive, and ash content using wet chemical methods. Wet chemical methods will then be used to calibrate the near infrared reflectance spectoscopy methods. ************************************************************************ FSDB Variable Code Definitions TD23 01/21/03 ************************************************************************ Variable: SITE ALL ALL SITES-USED FOR THE INITAL CHEMISTRY AS THE SAMPLES WERE NOT DECAYED AND APPLY TO ALL SITES AND H.J. ANDREWS EXPERIMENTAL FOREST, OREGON ARC ARCTIC SITE, TOOLIK LAKE, ALASKA BCI BARRO COLORADO ISLAND, PANAMA BNZ BONANZA CREEK EXPERIMENTAL FOREST FOREST, ALASKA BSF BLODGETT STATE RESEARCH FOREST, CALIFORNIA CDR CEDAR CREEK NATURAL HISTORY AREA, MINNESOTA CPR CENTRAL PLAINS EXPERIMENTAL RANGE, COLORADO CV CURLEY VALLEY, UTAH CWT COWEETA HYDROLOGICAL LABORATORY, NORTH CAROLINA GSF GUANICA STATE FOREST, PUERTO RICO EXT EXTRA SAMPLES NOT DECOMPOSED HBR HUBBARD BROOK EXPERIMENTAL FOREST, NEW HAMPSHIRE HFR HARVARD FOREST, MASSACHUSETTS JRN JORNADA EXPERIMENTAL RANGE and NEW MEXICO STATE UNIVERSITY RANCH JUN JUNEAU, ALASKA KBS KELLOGG BIOLOGICAL STATION, MICHIGAN KNZ KONZA PRAIRIE RESEARCH NATURAL AREA, KANSAS LBS LASELVA BIOLOGICAL STATION, COSTA RICA LUQ LUQUILLO EXPERIMENTAL FOREST, PUERTO RICO LVW LOCH VALE WATERSHED, COLORADO MTV MONTE VERDE, COSTA RICA NIN NORTH INLET (HOBCAW BARONY), SOUTH CAROLINA NLK NORTH TEMPERATE LAKES (TROUT LAKE STATION), WISCONSIN NWT NIWOT RIDGE and GREEN LAKES VALLEY, COLORADO OLY OLYMPIC NATIONAL PARK, WASHINGTON SEV SEVILLETA, NEW MEXICO SMR SANTA MARGARITA ECOLOGICAL RESERVE, CALIFORNIA UFL UNIVERSITY OF FLORIDA, FLORIDA VCR VIRGINIA COAST RESERVE, VIRGINIA UBC UNIVERSITY OF BRITISH COLUMBIA, CANADA Variable: SPECIES ABCO ABIES CONCOLOR ABLA ABIES LASIOCARPA ABAM ABIES AMABILIS ACSA ACER SACCHARUM, SUGAR MAPLE AMBR AMMOPHIA BREVILIGULATA, BEACH GRASS ANGE SCHIZACHYRIUM GERARDI, BIG BLUE STEM Variable: SPECIES ANSC SCHIZACHYRIUM SCOPARIUM, LITTLE BLUE STEM BELU BETULA LUTEA, YELLOW BIRCH BOER BOUTLOUA ERIOPODA, BLACK GRAMMA BOGR BOUTLOUA GRACILIS, BLUE GRAMMA CEGR CEANOTHUS GREGGII CONU CORNUS NUTTALII, PACIFIC DOGWOOD DRGL DRYPETES GLAUCA FAGR FAGUS GRANDIFOLIA, BEECH GOBA GONYSTYLUS BANCANUS, RAMIN GYLU GYMNANTHES LUCIDA KOMY KOBRESIA MYOSUROIDES LATR LARREA TRIDENTATA, CREOSOTE BUSH LITU LIRIODENDRON TULIPIFERA, YELLOW POPLAR MYCE MYRICA CERIFER, WAX MYRTLE PIEL PINUS ELLIOTII, SLASH PINE PIRE PINUS RESINOSA, RED PINE PIST PINUS STROBUS, EASTERN WHITE PINE POTR POPULUS TREMULOIDES, ASPEN PSTD PINE NEEDLE STANDARD PSME PSEUDOTSUGA MENZIESII, DOUGLAS-FIR QUPR QUERCUS PRINUS, CHESTNUT OAK RHMA RHODODENDRON MACROPHYLLUM, PACIFIC RHODODENDRON ROPS ROBINEA PSEUDOACACIA, BLACK LOCUST SPAL SPARTINA ALTERNIFOLIA, SALT WATER CORDGRASS THPL THUJA PLICATA, WESTERN RED CEDAR TRAE TRITICUM AESTIVUM, WHEAT VOFE VOCHYSIA FERRAGENEA ACCI ACER CIRCINATUM ACMA ACER MACROPHYLLUM PIMO PINUS MONTICOLA ABBA ABIES BALSAMEA ABLA2 ABIES LASIOCARPA BETUL BETULA SPECIES CHNO CHAMAECYPARIS NOOTKATENSIS CLADO CLADONIA SPECIES (LICHEN) EPAN EPILOBIUM ANGUSTIFOLIUM LAOC LARIX OCCIDENTALIS PICO PINUS CONTORTA PICOB PINUS CONTORTA (BROWN LEAVES) PICOG PINUS CONTORTA (GREEN LEAVES) PIEN PICEA ENGELMANNII PIGL PICEA GLAUCA PIPO PINUS PONDEROSA PISI PICEA SITCHENSIS TSHE TSUGA HETEROPHYLLA TSME TSUGA MERTENSIANA LALA LARIX LARICINA PIMA PICEA MARIANA Variable: TYPE A ABOVE PART OF WOODEN DOWELS B BELOW PART OF WOODEN DOWELS L LEAVES M MNERAL SOIL R FINE ROOTS W WOODEN DOWELS Variable: REP 1 INDICATES REPLICATE 1 2 INDICATES REPLICATE 2 3 INDICATES REPLICATE 3 4 INDICATES REPLICATE 4 P INDICATES POOLED SAMPLE I INDICATES INITIAL SAMPLE OF ORIGINAL MATERIAL Variable: EST E INDICATES A POOLED SAMPLE WAS USED TO ESTIMATE THE ASHFREE PROPORTION. BLANK INDICATES ACTUAL SAMPLE WAS ASHED ? INDICATES QUESTIONAL SAMPLE, MAY HAVE BEEN LOST P INDICATES POOLED SAMPLE Variable: NIR_EST E INDICATES A POOLED SAMPLE WAS USED TO ESTIMATE AN ASH FREE PORTION BLANK INDICATES ACTUAL SAMPLE WAS ASHED Variable: NIR_LAB OSU OREGON STATE UNIVERSITY NIR LAB Variable: LAB MBL MARINE BIOLOGICAL LABORATORY OSU OREGON STATE UNIVERSITY CAL Central Analytical Lab, OSU Soil and Horticulture Dept. UMD UNIVERSITY OF MINNESOTA, DULUTH UNH UNIVERSITY OF NEW HAMPSHIRE MMI Micro-Macro International, Athens, GA Variable: COMMENT X BAG TORN WITH OBVIOUS SAMPLE LOSS T BAG TORN WITH SAMPLE LOSS UNKNOWN U TAG DISCONNECTED; ID QUESTIONABLE F FOREIGN MATERIAL IN SAMPLE (I.E. ROCKS) M SAMPLE MISSING D TAG DISCONNECTED; ID GOOD XF TORN BAG WITH SAMPLE LOSS AND FOREIGN MATERIAL TF TORN BAG SAMPLE LOSS UNKNOWN AND FOREIGN MATERIAL TU TORN BAG AND TAG DISCONNECTED TD TORN BAG LOSS UNKNOWN; ID GOOD TFU TORN BAG WITH FOREIGN MATERIAL TAG DISCONNECTED; ID QUESTIONABLE TX TORN BAG WITH OBVIOUS SAMPLE LOSS UF TAG DISCONNECTED; ID QUESTIONABLE PLUS FOREIGN MATERIAL UT TAG DISCONNECTED; ID QUESTIONABLE AND TORN BAG UX TAG DISCONNECTED; ID QUESTIONABLE AND TORN BAG WITH OBVIOUS SAMPLE LOSS XFU TORN BAG WITH SAMPLE LOSS AND FOREIGN MATERIAL PLUS TAG DISCONNECTED
Notes: Only the Arctic LTER data is presented here. See http://www.fsl.orst.edu/lter/research/intersite/lidet.htm for all the data. This is the format 9 file. Reference Citations: Melillo. 1988. Foliar analysis using near infrared reflectance spectroscopy. Can. J. For. Res. 18:6-11
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Data Table
| Variable Name |
Variable Description |
Data Type |
Units |
DateTime Format |
Code Information |
Missing Value Code |
| StCode |
THIS DATA IS FOR THE LIDET INTERSITE DECOMPOSITION EXPERIMENT |
text |
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| Format |
THIS DATA IS THE INITIAL AND FINAL MASS DATA |
text |
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| Site |
THE SITE WHERE THE LITTER WAS INCUBATED |
text |
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| Rep |
REPLICATE IN FIELD, 1-4; P FOR POOLED; I FOR INITIAL SAMPLE |
text |
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| Time |
THE TIME THE LITTER WILL BE HARVESTED. |
text |
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| Species |
THE SPECIES OF THE LITTER |
text |
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| Type |
THE SUBSTRATE OF LITTER (E.G., LEAVES, ROOTS, WOOD) |
text |
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| NIR_NUM |
UNIQUE SAMPLE NUMBER |
text |
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| Mesh |
THE MESH SIZE OF THE BAG. FOR LEAVES THIS CORRESPONDS TO THE TOP SIDE OF THE BAG; ALL THE BOTTOMS WERE 0.1 MM FOR LEAVES. |
text |
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| DateOut |
THE DATE THE BAGS WERE PLACED OUT IN THE FIELD. |
datetime |
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mm/dd/yyyy |
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| IADW |
THE INITIAL AIR DRY WEIGHT OF THE CONTENTS OF THE LITTERBAG, OR THE WOODEN DOWEL |
number |
gram |
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#N/A |
| IODW |
THE INITIAL OVEN DRY WEIGHT OF THE CONTENTS OF THE LITTERBAG, OR THE WOODEN DOWEL |
number |
gram |
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#N/A |
| DateIn |
THE DATE THE LITTER BAG WAS HARVESTED FROM THE FIELD. |
datetime |
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mm/dd/yyyy |
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| FWW |
THE FINAL WET WEIGHT OF THE LITTER BAG CONTENTS. |
number |
gram |
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#N/A |
| FOW |
THE FINAL OVEN DRY WEIGHT (55c) OF THE LITTER BAG CONTENTS. |
number |
gram |
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#N/A |
| Length |
THE LENGTH OF WOODEN DOWELS, THE SUM OF ABOVE AND BELOW LENGTH SHOULD BE 61.0 CM |
number |
centimeter |
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#N/A |
| IADW1 |
WOODEN DOWEL VARIABLE, INITIAL AIR DRY WEIGHT FOR ABOVE OR BELOW PART OF DOWEL (APPLIES ONLY TO TYPE 'A' OR 'B') |
number |
gram |
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#N/A |
| IODW1 |
WOODEN DOWEL VARIABLE, INITIAL OVEN DRY WEIGHT FOR ABOVE OR BELOW PART OF DOWEL (APPLIES ONLY TO TYPE 'A' OR 'B') |
number |
gram |
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#N/A |
| IASH |
PERCENT INITIAL ASH CONTENT |
number |
percent |
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#N/A |
| FASH |
PERCENT FINAL ASH CONTENT |
number |
percent |
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#N/A |
| IAFW |
INITIAL ASH FREE WEIGHT (IOW*IASH) |
number |
gram |
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#N/A |
| FAFW |
FINAL ASH FREE WEIGHT (FOW*FASH) |
number |
gram |
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#N/A |
| PRM |
PERCENT REMAINING MASS |
number |
percent |
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#N/A |
| PAFRM |
PERCENT ASH FREE REMAINING MASS |
number |
percent |
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#N/A |
| KDW |
DECAY RATE DRY WEIGHT BASIS IOW/FOW |
number |
dimensionless |
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#N/A |
| KAFW |
DECAY RATE ASH FREE WEIGHT BASIS FAFW/IAFW |
number |
dimensionless |
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#N/A |
| Type1 |
INDICATED SUBSTRATE (W FOR DOWEL, INSTEAD OF 'A' OR 'B') |
text |
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| TimeOut |
TIME IN YEARS THAT LITTER SAMPLE INCUBATED IN FIELD |
number |
number |
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#N/A |
| Comment |
COMMENT FROM FIELD SHEETS |
text |
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| Flag |
FLAGGED AS UNUSUAL OUTLIER |
text |
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Please contact arc_im@mbl.edu with questions, comments, or for technical assistance regarding this web site. |
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